Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 23978
95 % 2 2 20460 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.1
PDBFlex
90 % 2 2 19891
70 % 2 2 18323
50 % 2 2 15951
40 % 2 2 14246
30 % 2 2 12215
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 46266
95 % 7 7 5908 Flexibility: Low
Max RMSD: 6.0, Avg RMSD: 0.9
PDBFlex
90 % 7 7 5900
70 % 7 7 5773
50 % 7 7 5422
40 % 12 12 3473
30 % 12 12 3255

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.