Sequence Similarity Clusters for the Entities in PDB 1AW8

Entity #1 | Chains: A,D
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 24 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 25740
95 % 2 2 21903 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.0
PDBFlex
90 % 2 2 21255
70 % 2 2 19497
50 % 2 2 16921
40 % 2 2 15089
30 % 2 2 12932
Entity #2 | Chains: B,E
L-ASPARTATE-ALPHA-DECARBOXYLASE protein, length: 91 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 49218
95 % 8 8 5424
90 % 8 8 5450
70 % 8 8 5352
50 % 8 8 5104
40 % 13 13 3528
30 % 13 13 3300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures