Sequence Similarity Clusters for the Entities in PDB 1AVZ

Entity #1 | Chains: A,B
NEGATIVE FACTOR protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16311
95 % 4 5 6671 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 5 6665
70 % 8 12 2341
50 % 10 15 1922
40 % 10 15 1920
30 % 10 15 1850
Entity #2 | Chains: C
FYN TYROSINE KINASE protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 2439
95 % 10 15 2477 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.7
PDBFlex
90 % 10 15 2538
70 % 34 49 760
50 % 40 66 562
40 % 147 287 126
30 % 625 1062 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures