Sequence Similarity Clusters for the Entities in PDB 1AVZ

Entity #1 | Chains: A,B
NEGATIVE FACTOR protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15106
95 % 4 5 6197 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 5 6185
70 % 8 11 2873
50 % 9 13 2462
40 % 9 13 2431
30 % 9 13 2305
Entity #2 | Chains: C
FYN TYROSINE KINASE protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 2235
95 % 10 15 2271 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.7
PDBFlex
90 % 10 15 2338
70 % 30 45 807
50 % 35 61 578
40 % 139 279 119
30 % 558 972 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.