Sequence Similarity Clusters for the Entities in PDB 1AVZ

Entity #1 | Chains: A,B
NEGATIVE FACTOR protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15669
95 % 4 5 6448 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 4 5 6430
70 % 8 11 2974
50 % 10 14 2304
40 % 10 14 2291
30 % 10 14 2187
Entity #2 | Chains: C
FYN TYROSINE KINASE protein, length: 57 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 13 2341
95 % 10 15 2365 Flexibility: Low
Max RMSD: 2.9, Avg RMSD: 0.7
PDBFlex
90 % 10 15 2426
70 % 34 49 746
50 % 40 66 545
40 % 145 285 120
30 % 606 1038 9

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.