Sequence Similarity Clusters for the Entities in PDB 1AVX

Entity #1 | Chains: A
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 23 1471
95 % 24 31 1407 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 24 31 1432
70 % 447 532 18
50 % 504 683 14
40 % 1046 1695 4
30 % 1122 1845 6
Entity #2 | Chains: B
TRYPSIN INHIBITOR protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 15509
95 % 2 4 14545 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 2 4 14272
70 % 2 4 13391
50 % 2 4 11911
40 % 5 29 1443
30 % 17 56 676

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.