Sequence Similarity Clusters for the Entities in PDB 1AVW

Entity #1 | Chains: A
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 23 1480
95 % 15 31 1416 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 15 31 1440
70 % 337 532 19
50 % 365 683 14
40 % 664 1698 4
30 % 696 1848 6
Entity #2 | Chains: B
TRYPSIN INHIBITOR protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15593
95 % 1 4 14621 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 4 14349
70 % 1 4 13472
50 % 1 4 11976
40 % 2 29 1450
30 % 8 56 679

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures