Sequence Similarity Clusters for the Entities in PDB 1AVW

Entity #1 | Chains: A
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 23 1449
95 % 15 31 1397 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 15 31 1421
70 % 337 527 19
50 % 365 678 14
40 % 664 1685 4
30 % 696 1834 6
Entity #2 | Chains: B
TRYPSIN INHIBITOR protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15381
95 % 1 4 14441 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 4 14169
70 % 1 4 13311
50 % 1 4 11838
40 % 2 29 1435
30 % 8 56 672

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.