Sequence Similarity Clusters for the Entities in PDB 1AVW

Entity #1 | Chains: A
TRYPSIN protein, length: 223 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 23 1513
95 % 15 31 1451 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 15 31 1479
70 % 350 548 19
50 % 378 699 14
40 % 680 1721 4
30 % 712 1871 6
Entity #2 | Chains: B
TRYPSIN INHIBITOR protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 15899
95 % 1 4 14864 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.5
PDBFlex
90 % 1 4 14591
70 % 1 4 13687
50 % 1 4 12162
40 % 2 29 1473
30 % 8 56 688

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures