Sequence Similarity Clusters for the Entities in PDB 1AVV

Entity #1 | Chains: A
NEGATIVE FACTOR protein, length: 151 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 15541
95 % 5 5 6387 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.7
PDBFlex
90 % 5 5 6371
70 % 9 11 2952
50 % 11 14 2291
40 % 11 14 2278
30 % 11 14 2174

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.