Sequence Similarity Clusters for the Entities in PDB 1AVQ

Entity #1 | Chains: A,B,C
LAMBDA EXONUCLEASE protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 7503
95 % 3 4 5994 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.8
PDBFlex
90 % 3 4 6012
70 % 3 4 5877
50 % 3 4 5529
40 % 3 4 5192
30 % 3 4 4694

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures