Sequence Similarity Clusters for the Entities in PDB 1AVP

Entity #1 | Chains: A
ADENOVIRAL PROTEINASE protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 13577
95 % 6 6 12996 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 1.3
PDBFlex
90 % 6 6 12779
70 % 10 11 5271
50 % 10 11 5027
40 % 10 11 4745
30 % 10 11 4345
Entity #2 | Chains: B
ADENOVIRAL PROTEINASE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures