Sequence Similarity Clusters for the Entities in PDB 1AVP

Entity #1 | Chains: A
ADENOVIRAL PROTEINASE protein, length: 204 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 12732
95 % 6 6 12225 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 6 6 12027
70 % 10 11 4933
50 % 10 11 4728
40 % 10 11 4475
30 % 10 11 4099
Entity #2 | Chains: B
ADENOVIRAL PROTEINASE protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.