Sequence Similarity Clusters for the Entities in PDB 1AVO

Entity #1 | Chains: A,C,E,G,I,K,M
11S REGULATOR protein, length: 60 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 10379
95 % 1 1 10375
90 % 1 1 10239
70 % 1 1 9703
50 % 1 1 8817
40 % 1 1 8070
30 % 1 1 7102
Entity #2 | Chains: B,D,F,H,J,L,N
11S REGULATOR protein, length: 140 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 10177
95 % 1 1 10195
90 % 1 1 10058
70 % 1 1 9539
50 % 1 1 8669
40 % 1 1 7941
30 % 1 1 6995

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.