Sequence Similarity Clusters for the Entities in PDB 1AVG

Entity #1 | Chains: L
THROMBIN protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27489
95 % 1 2 22776
90 % 1 2 22063
70 % 18 24 1373
50 % 28 41 764
40 % 28 41 797
30 % 28 41 798
Entity #2 | Chains: H
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 22 1034
95 % 12 22 1452
90 % 12 22 1475
70 % 338 398 40
50 % 338 398 70
40 % 1396 1605 4
30 % 1510 1747 6
Entity #3 | Chains: I
TRIABIN protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60374
95 % 1 1 41569
90 % 1 1 39559
70 % 1 1 34961
50 % 1 1 29899
40 % 1 1 26409
30 % 1 1 22383

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.