Sequence Similarity Clusters for the Entities in PDB 1AVG

Entity #1 | Chains: L
THROMBIN protein, length: 41 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 28728
95 % 1 2 23813
90 % 1 2 23056
70 % 19 25 1398
50 % 29 42 814
40 % 29 42 845
30 % 29 42 829
Entity #2 | Chains: H
THROMBIN protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 22 1108
95 % 12 22 1515
90 % 12 22 1543
70 % 341 401 44
50 % 341 401 78
40 % 1422 1635 4
30 % 1536 1777 6
Entity #3 | Chains: I
TRIABIN protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 62819
95 % 1 1 43257
90 % 1 1 41119
70 % 1 1 36243
50 % 1 1 30942
40 % 1 1 27326
30 % 1 1 23159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.