Sequence Similarity Clusters for the Entities in PDB 1AVF

Entity #1 | Chains: P,Q
GASTRICSIN protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 47025
95 % 1 1 35169
90 % 1 1 33649
70 % 1 1 30080
50 % 1 1 25839
40 % 1 1 22868
30 % 1 1 19470
Entity #2 | Chains: A,J
GASTRICSIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 24860
95 % 2 2 20901
90 % 2 2 20334
70 % 2 2 18762
50 % 20 22 2342
40 % 69 110 248
30 % 642 707 26

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.