Sequence Similarity Clusters for the Entities in PDB 1AVF

Entity #1 | Chains: P,Q
GASTRICSIN protein, length: 26 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 48799
95 % 1 1 36524
90 % 1 1 34892
70 % 1 1 31088
50 % 1 1 26637
40 % 1 1 23563
30 % 1 1 20059
Entity #2 | Chains: A,J
GASTRICSIN protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 25918
95 % 2 2 21813
90 % 2 2 21197
70 % 2 2 19463
50 % 20 22 2455
40 % 70 111 250
30 % 647 712 29

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.