Sequence Similarity Clusters for the Entities in PDB 1AVD

Entity #1 | Chains: A,B
AVIDIN protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 12 2101
95 % 17 25 740 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.2
PDBFlex
90 % 18 27 704
70 % 29 40 386
50 % 33 44 440
40 % 33 44 467
30 % 190 202 95

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.