Sequence Similarity Clusters for the Entities in PDB 1AVA

Entity #1 | Chains: A,B
BARLEY ALPHA-AMYLASE 2(CV MENUET) protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 17031
95 % 1 3 15468
90 % 1 3 15174
70 % 7 13 3111
50 % 7 13 3043
40 % 7 13 2975
30 % 7 13 2781
Entity #2 | Chains: C,D
BARLEY ALPHA-AMYLASE/SUBTILISIN INHIBITOR protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20889
95 % 2 3 13837
90 % 2 3 13579
70 % 2 3 12732
50 % 2 3 11369
40 % 2 3 10306
30 % 16 56 646

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.