Sequence Similarity Clusters for the Entities in PDB 1AVA

Entity #1 | Chains: A,B
BARLEY ALPHA-AMYLASE 2(CV MENUET) protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 16516
95 % 1 3 15008
90 % 1 3 14725
70 % 7 13 3039
50 % 7 13 2972
40 % 7 13 2896
30 % 7 13 2715
Entity #2 | Chains: C,D
BARLEY ALPHA-AMYLASE/SUBTILISIN INHIBITOR protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 20276
95 % 2 3 13441
90 % 2 3 13194
70 % 2 3 12378
50 % 2 3 11068
40 % 2 3 10040
30 % 16 56 624

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.