Sequence Similarity Clusters for the Entities in PDB 1AVA

Entity #1 | Chains: A,B
BARLEY ALPHA-AMYLASE 2(CV MENUET) protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 3 17667
95 % 1 3 16022
90 % 1 3 15708
70 % 7 13 3208
50 % 7 13 3135
40 % 7 13 3059
30 % 7 13 2861
Entity #2 | Chains: C,D
BARLEY ALPHA-AMYLASE/SUBTILISIN INHIBITOR protein, length: 181 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21629
95 % 2 3 14296
90 % 2 3 14025
70 % 2 3 13186
50 % 2 3 11738
40 % 2 3 10639
30 % 16 56 663

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.