Sequence Similarity Clusters for the Entities in PDB 1AV5

Entity #1 | Chains: A,B
PROTEIN KINASE C INTERACTING PROTEIN protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 26 28 594
95 % 43 46 508 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 43 46 538
70 % 43 46 565
50 % 45 48 577
40 % 45 48 613
30 % 45 48 599

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures