Sequence Similarity Clusters for the Entities in PDB 1AV1

Entity #1 | Chains: A,B,C,D
APOLIPOPROTEIN A-I protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 6016
95 % 1 5 6206 Flexibility: Medium
Max RMSD: 4.9, Avg RMSD: 3.3
PDBFlex
90 % 1 5 6201
70 % 1 6 4994
50 % 1 6 4761
40 % 1 6 4483
30 % 1 6 3975

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures