Sequence Similarity Clusters for the Entities in PDB 1AV1

Entity #1 | Chains: A,B,C,D
APOLIPOPROTEIN A-I protein, length: 201 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 4905
95 % 1 5 5591 Flexibility: Medium
Max RMSD: 4.9, Avg RMSD: 3.3
PDBFlex
90 % 1 5 5595
70 % 1 6 4500
50 % 1 6 4339
40 % 1 6 4141
30 % 1 6 3802

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.