Sequence Similarity Clusters for the Entities in PDB 1AUX

Entity #1 | Chains: A,B
SYNAPSIN IA protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18604
95 % 2 2 16557 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.8
PDBFlex
90 % 2 2 16217
70 % 3 4 8189
50 % 3 4 7452
40 % 3 4 6870
30 % 3 4 6088

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.