Sequence Similarity Clusters for the Entities in PDB 1AUX

Entity #1 | Chains: A,B
SYNAPSIN IA protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 19684
95 % 2 2 17454
90 % 2 2 17101
70 % 3 4 8596
50 % 3 4 7828
40 % 3 4 7215
30 % 3 4 6386

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures