Sequence Similarity Clusters for the Entities in PDB 1AUV

Entity #1 | Chains: A,B
SYNAPSIN IA protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 23051
95 % 1 2 20593 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 19996
70 % 2 4 8309
50 % 2 4 7618
40 % 2 4 7721
30 % 2 4 6689

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures