Sequence Similarity Clusters for the Entities in PDB 1AUV

Entity #1 | Chains: A,B
SYNAPSIN IA protein, length: 311 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 19490
95 % 1 2 17296 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.9
PDBFlex
90 % 1 2 16951
70 % 2 4 8531
50 % 2 4 7764
40 % 2 4 7155
30 % 2 4 6331

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures