Sequence Similarity Clusters for the Entities in PDB 1AUS

Entity #1 | Chains: L,M,N,O
RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 1213
95 % 6 10 953 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.4
PDBFlex
90 % 24 34 163
70 % 27 41 162
50 % 31 47 173
40 % 34 56 145
30 % 50 86 116
Entity #2 | Chains: S,T,U,V
RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 771
95 % 5 9 1057 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 6 10 997
70 % 13 20 600
50 % 23 33 230
40 % 26 38 215
30 % 26 38 223

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.