Sequence Similarity Clusters for the Entities in PDB 1AUS

Entity #1 | Chains: L,M,N,O
RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE protein, length: 475 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 6 1261
95 % 6 10 979 Flexibility: No
Max RMSD: 1.3, Avg RMSD: 0.5
PDBFlex
90 % 24 34 168
70 % 27 41 165
50 % 31 48 177
40 % 34 57 150
30 % 50 87 116
Entity #2 | Chains: S,T,U,V
RIBULOSE BISPHOSPHATE CARBOXYLASE/OXYGENASE protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 9 797
95 % 5 9 1092 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 6 10 1026
70 % 13 20 622
50 % 23 33 241
40 % 26 38 221
30 % 26 38 231

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.