Sequence Similarity Clusters for the Entities in PDB 1AUM

Entity #1 | Chains: A
HIV CAPSID protein, length: 70 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 21 176
95 % 5 24 228 Flexibility: Medium
Max RMSD: 11.8, Avg RMSD: 4.7
PDBFlex
90 % 5 24 243
70 % 5 24 275
50 % 5 24 310
40 % 6 25 318
30 % 6 25 332

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.