Sequence Similarity Clusters for the Entities in PDB 1AUI

Entity #1 | Chains: A
SERINE/THREONINE PHOSPHATASE 2B protein, length: 521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59638
95 % 1 2 30402 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 29169
70 % 1 5 13620
50 % 1 5 12062
40 % 1 5 10863
30 % 1 5 9251
Entity #2 | Chains: B
SERINE/THREONINE PHOSPHATASE 2B protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 12 4229
95 % 3 12 4556 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 3 12 4595
70 % 3 12 4477
50 % 4 13 3975
40 % 4 16 3135
30 % 96 432 42

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures