Sequence Similarity Clusters for the Entities in PDB 1AUI

Entity #1 | Chains: A
SERINE/THREONINE PHOSPHATASE 2B protein, length: 521 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51921
95 % 1 2 26215 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 25334
70 % 1 5 12808
50 % 1 5 11422
40 % 1 5 10363
30 % 1 5 9049
Entity #2 | Chains: B
SERINE/THREONINE PHOSPHATASE 2B protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 12 3717
95 % 3 12 4518 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.7
PDBFlex
90 % 3 12 4543
70 % 3 12 4465
50 % 4 13 4035
40 % 4 13 3861
30 % 80 371 52

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures