Sequence Similarity Clusters for the Entities in PDB 1AUD

Entity #1 | Chains: B
RNA 3UTR rna, length: 30 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A
U1A 102 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 60 60 289
95 % 63 63 350
90 % 63 63 373
70 % 65 65 399
50 % 65 65 471
40 % 65 65 509
30 % 65 65 510

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures