Sequence Similarity Clusters for the Entities in PDB 1ATP

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 60 540
95 % 116 202 137 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 116 203 144
70 % 116 203 167
50 % 116 203 197
40 % 116 203 212
30 % 1624 3966 2
Entity #2 | Chains: I
PEPTIDE INHIBITOR PKI(5-24) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 78 126 199
95 % 78 126 264 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 100 152 236
70 % 100 152 269
50 % 100 152 290
40 % 100 152 310
30 % 100 152 315

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures