Sequence Similarity Clusters for the Entities in PDB 1ATP

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 60 523
95 % 107 192 137 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 107 193 146
70 % 107 193 166
50 % 107 193 195
40 % 107 193 212
30 % 1546 3825 2
Entity #2 | Chains: I
PEPTIDE INHIBITOR PKI(5-24) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 121 194
95 % 73 121 262 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 95 147 230
70 % 95 147 261
50 % 95 147 285
40 % 95 147 303
30 % 95 147 314

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.