Sequence Similarity Clusters for the Entities in PDB 1ATP

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 35 67 514
95 % 165 253 123 Flexibility: Low
Max RMSD: 4.6, Avg RMSD: 0.9
PDBFlex
90 % 165 254 126
70 % 165 254 146
50 % 165 254 173
40 % 197 340 132
30 % 1820 4330 2
Entity #2 | Chains: I
PEPTIDE INHIBITOR PKI(5-24) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 109 161 179
95 % 109 161 222 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 109 161 232
70 % 109 161 253
50 % 109 161 279
40 % 109 161 310
30 % 109 161 320

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures