Sequence Similarity Clusters for the Entities in PDB 1ATP

Entity #1 | Chains: E
cAMP-DEPENDENT PROTEIN KINASE protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 60 533
95 % 107 192 140 Flexibility: Low
Max RMSD: 4.8, Avg RMSD: 0.9
PDBFlex
90 % 107 193 150
70 % 107 193 169
50 % 107 193 200
40 % 107 193 219
30 % 1594 3912 2
Entity #2 | Chains: I
PEPTIDE INHIBITOR PKI(5-24) protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 121 199
95 % 73 121 271 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.7
PDBFlex
90 % 95 147 236
70 % 95 147 269
50 % 95 147 294
40 % 95 147 314
30 % 95 147 319

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures