Sequence Similarity Clusters for the Entities in PDB 1ATN

Entity #1 | Chains: A
ACTIN protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 68 137 8
95 % 100 197 9
90 % 102 203 10
70 % 106 208 13
50 % 106 215 15
40 % 115 234 24
30 % 124 254 42
Entity #2 | Chains: D
DEOXYRIBONUCLEASE I protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 59737
95 % 10 11 5925 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 10 11 5945
70 % 11 12 5229
50 % 11 12 4987
40 % 11 12 4712
30 % 11 12 4316

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures