Sequence Similarity Clusters for the Entities in PDB 1ATN

Entity #1 | Chains: A
ACTIN protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 70 150 8
95 % 101 205 9 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 0.9
PDBFlex
90 % 103 211 9
70 % 107 216 11
50 % 107 223 15
40 % 116 242 25
30 % 125 262 39
Entity #2 | Chains: D
DEOXYRIBONUCLEASE I protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 11 5722
95 % 10 11 6017 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 10 11 6017
70 % 11 12 5376
50 % 11 12 5114
40 % 11 12 4798
30 % 11 12 4303

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures