Sequence Similarity Clusters for the Entities in PDB 1ATN

Entity #1 | Chains: A
ACTIN protein, length: 373 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 67 123 23
95 % 99 179 15
90 % 101 184 15
70 % 105 189 23
50 % 105 192 36
40 % 114 211 41
30 % 123 231 53
Entity #2 | Chains: D
DEOXYRIBONUCLEASE I protein, length: 260 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57358
95 % 10 11 5654 Flexibility: Low
Max RMSD: 1.2, Avg RMSD: 0.6
PDBFlex
90 % 10 11 5664
70 % 11 12 4984
50 % 11 12 4770
40 % 11 12 4515
30 % 11 12 4143

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.