Sequence Similarity Clusters for the Entities in PDB 1ATJ

Entity #1 | Chains: A,B,C,D,E,F
PEROXIDASE C1A protein, length: 306 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 23 23 1732
95 % 30 31 1359 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 30 31 1385
70 % 30 31 1411
50 % 34 38 1124
40 % 38 43 1013
30 % 249 303 162

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures