Sequence Similarity Clusters for the Entities in PDB 1AT3

Entity #1 | Chains: A,B
HERPES SIMPLEX VIRUS TYPE II PROTEASE protein, length: 247 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37334
95 % 1 1 28820 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.2
PDBFlex
90 % 1 1 27832
70 % 1 1 25185
50 % 4 5 6044
40 % 4 5 5644
30 % 4 5 5058

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.