Sequence Similarity Clusters for the Entities in PDB 1ASZ

Entity #1 | Chains: R,S
T-RNA (75-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
ASPARTYL-tRNA SYNTHETASE protein, length: 490 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15680
95 % 2 3 14589 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 2 3 14311
70 % 2 3 13377
50 % 4 5 7740
40 % 5 6 5899
30 % 19 21 1390

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures