Sequence Similarity Clusters for the Entities in PDB 1ASZ

Entity #1 | Chains: R,S
T-RNA (75-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
ASPARTYL-tRNA SYNTHETASE protein, length: 490 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 14559
95 % 2 3 13790 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 2 3 13570
70 % 2 3 12764
50 % 3 4 8634
40 % 3 4 7915
30 % 16 18 1554

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures