Sequence Similarity Clusters for the Entities in PDB 1ASZ

Entity #1 | Chains: R,S
T-RNA (75-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
ASPARTYL-tRNA SYNTHETASE protein, length: 490 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 16607
95 % 2 3 15460 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 2 3 15165
70 % 2 3 14119
50 % 4 5 8124
40 % 5 6 6161
30 % 20 22 1447

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures