Sequence Similarity Clusters for the Entities in PDB 1ASY

Entity #1 | Chains: R,S
T-RNA (75-MER) rna, length: 75 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
ASPARTYL-tRNA SYNTHETASE protein, length: 490 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 14138
95 % 3 3 13401 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 3 3 13184
70 % 3 3 12379
50 % 4 4 8407
40 % 4 4 7711
30 % 17 18 1523

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.