Sequence Similarity Clusters for the Entities in PDB 1ASJ

Entity #1 | Chains: 0
P1/MAHONEY POLIOVIRUS protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
P1/MAHONEY POLIOVIRUS protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 21 2196
95 % 8 25 2250 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 8 25 2316
70 % 10 36 1486
50 % 14 42 1307
40 % 46 155 275
30 % 46 155 282
Entity #3 | Chains: 2
P1/MAHONEY POLIOVIRUS protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 29 1415
95 % 8 31 1737 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 8 31 1769
70 % 14 48 1102
50 % 44 157 294
40 % 44 157 307
30 % 58 192 164
Entity #4 | Chains: 3
P1/MAHONEY POLIOVIRUS protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 31 1290
95 % 8 31 1741 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 8 31 1773
70 % 14 48 1105
50 % 46 164 241
40 % 46 166 257
30 % 61 203 147
Entity #5 | Chains: 4
P1/MAHONEY POLIOVIRUS protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 21 2262
95 % 9 23 2633 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 10 33 1659
70 % 20 87 548
50 % 39 122 421
40 % 40 123 446
30 % 40 123 445

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.