Sequence Similarity Clusters for the Entities in PDB 1ASJ

Entity #1 | Chains: 0
P1/MAHONEY POLIOVIRUS protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
P1/MAHONEY POLIOVIRUS protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 21 2279
95 % 8 25 2314 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 8 25 2377
70 % 10 36 1531
50 % 14 42 1344
40 % 45 159 276
30 % 45 159 285
Entity #3 | Chains: 2
P1/MAHONEY POLIOVIRUS protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 29 1466
95 % 8 31 1787 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 8 31 1823
70 % 14 48 1136
50 % 43 159 303
40 % 43 159 315
30 % 57 194 165
Entity #4 | Chains: 3
P1/MAHONEY POLIOVIRUS protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 31 1336
95 % 8 31 1791 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 8 31 1826
70 % 14 48 1139
50 % 45 168 240
40 % 45 170 258
30 % 60 209 148
Entity #5 | Chains: 4
P1/MAHONEY POLIOVIRUS protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 8 21 2342
95 % 9 23 2714 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 10 33 1712
70 % 20 87 565
50 % 38 122 435
40 % 39 123 463
30 % 39 123 460

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.