Sequence Similarity Clusters for the Entities in PDB 1AR9

Entity #1 | Chains: 0
P1/MAHONEY POLIOVIRUS protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
P1/MAHONEY POLIOVIRUS protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 25 2198
95 % 6 25 2502 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 6 25 2577
70 % 8 36 1603
50 % 13 57 1061
40 % 40 160 301
30 % 40 160 314
Entity #3 | Chains: 2
P1/MAHONEY POLIOVIRUS protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 31 1633
95 % 6 31 1936 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 6 31 1977
70 % 12 49 1176
50 % 39 160 350
40 % 39 160 375
30 % 54 197 181
Entity #4 | Chains: 3
P1/MAHONEY POLIOVIRUS protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 33 1510
95 % 7 33 1780 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 7 33 1823
70 % 12 49 1187
50 % 40 169 258
40 % 40 171 282
30 % 56 210 162
Entity #5 | Chains: 4
P1/MAHONEY POLIOVIRUS protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 21 2747
95 % 6 21 3080 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 8 33 1807
70 % 17 87 595
50 % 34 122 459
40 % 35 123 491
30 % 35 123 490

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures