Sequence Similarity Clusters for the Entities in PDB 1AR6

Entity #1 | Chains: 0
P1/MAHONEY POLIOVIRUS protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
P1/MAHONEY POLIOVIRUS protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54170
95 % 10 25 2219 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 10 25 2288
70 % 13 34 1577
50 % 18 40 1380
40 % 57 149 283
30 % 57 149 289
Entity #3 | Chains: 2
P1/MAHONEY POLIOVIRUS protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 29 1390
95 % 9 31 1706 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 9 31 1739
70 % 17 46 1143
50 % 52 151 305
40 % 52 151 317
30 % 67 186 166
Entity #4 | Chains: 3
P1/MAHONEY POLIOVIRUS protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 31 1266
95 % 10 31 1711 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 10 31 1744
70 % 18 46 1145
50 % 57 158 249
40 % 57 160 264
30 % 73 197 151
Entity #5 | Chains: 4
P1/MAHONEY POLIOVIRUS protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 21 2231
95 % 10 23 2606 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 12 31 1779
70 % 25 82 588
50 % 47 117 432
40 % 48 118 460
30 % 48 118 457

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.