Sequence Similarity Clusters for the Entities in PDB 1AR6

Entity #1 | Chains: 0
P1/MAHONEY POLIOVIRUS protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: 1
P1/MAHONEY POLIOVIRUS protein, length: 302 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57946
95 % 10 25 2425 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 10 25 2489
70 % 13 36 1591
50 % 18 43 1364
40 % 56 160 279
30 % 56 160 293
Entity #3 | Chains: 2
P1/MAHONEY POLIOVIRUS protein, length: 272 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 29 1529
95 % 9 31 1882 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 9 31 1925
70 % 17 49 1152
50 % 51 160 338
40 % 51 160 353
30 % 67 195 169
Entity #4 | Chains: 3
P1/MAHONEY POLIOVIRUS protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 31 1402
95 % 10 31 1886 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 10 31 1929
70 % 18 49 1154
50 % 56 169 247
40 % 56 171 262
30 % 73 210 153
Entity #5 | Chains: 4
P1/MAHONEY POLIOVIRUS protein, length: 68 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 21 2440
95 % 10 23 2826 Flexibility: No
Max RMSD: 2.1, Avg RMSD: 0.4
PDBFlex
90 % 12 33 1811
70 % 25 87 591
50 % 46 122 452
40 % 47 123 477
30 % 47 123 470

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures