Sequence Similarity Clusters for the Entities in PDB 1AQF

Entity #1 | Chains: A,B,C,D,E,F,G,H
PYRUVATE KINASE protein, length: 530 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 1757
95 % 25 37 211 Flexibility: Low
Max RMSD: 4.5, Avg RMSD: 1.5
PDBFlex
90 % 25 37 221
70 % 27 43 184
50 % 42 68 144
40 % 48 77 141
30 % 48 77 157

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.