Sequence Similarity Clusters for the Entities in PDB 1AQC

Entity #1 | Chains: A,B
X11 protein, length: 172 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 17252
95 % 1 2 15994 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 1 2 19530
70 % 2 4 9709
50 % 2 4 8766
40 % 2 4 7965
30 % 2 4 6902
Entity #2 | Chains: C,D
PEPTIDE protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures