Sequence Similarity Clusters for the Entities in PDB 1APZ

Entity #1 | Chains: A,C
ASPARTYLGLUCOSAMINIDASE protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 22355
95 % 2 2 19295
90 % 2 2 18793
70 % 2 2 17343
50 % 2 2 15074
40 % 2 2 13421
30 % 2 2 11496
Entity #2 | Chains: B,D
ASPARTYLGLUCOSAMINIDASE protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 22902
95 % 2 2 19695 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 2 2 19167
70 % 2 2 17661
50 % 2 2 15341
40 % 2 2 13662
30 % 9 10 2858

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.