Sequence Similarity Clusters for the Entities in PDB 1APX

Entity #1 | Chains: A,B,C,D
CYTOSOLIC ASCORBATE PEROXIDASE protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 19129
95 % 1 1 17469 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 29 30 1687
70 % 29 30 1741
50 % 29 30 1779
40 % 33 36 1345
30 % 245 303 166

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures