Sequence Similarity Clusters for the Entities in PDB 1APX

Entity #1 | Chains: A,B,C,D
CYTOSOLIC ASCORBATE PEROXIDASE protein, length: 249 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 20122
95 % 1 1 18373 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 30 30 1803
70 % 30 30 1856
50 % 30 30 1886
40 % 34 36 1408
30 % 247 303 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures