Sequence Similarity Clusters for the Entities in PDB 1APW

Entity #1 | Chains: E
PENICILLOPEPSIN protein, length: 323 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 14 3780
95 % 12 14 4557 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 12 14 4578
70 % 12 14 4512
50 % 485 543 49
40 % 485 551 59
30 % 495 712 28
Entity #2 | Chains: I
INHIBITOR ISOVALERYL (IVA)-VAL-VAL-DIFLUOROSTATINE-N-METHYLAMINE protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.