Sequence Similarity Clusters for the Entities in PDB 1AP5

Entity #1 | Chains: A,B
MANGANESE SUPEROXIDE DISMUTASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13164
95 % 18 30 746 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 18 30 777
70 % 18 30 820
50 % 94 117 142
40 % 106 131 126
30 % 109 134 130

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures