Sequence Similarity Clusters for the Entities in PDB 1AP5

Entity #1 | Chains: A,B
MANGANESE SUPEROXIDE DISMUTASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 10 17 1366
95 % 18 30 810 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 18 30 837
70 % 18 30 888
50 % 104 129 134
40 % 115 142 127
30 % 117 144 141

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures