Sequence Similarity Clusters for the Entities in PDB 1AP2

Entity #1 | Chains: A,C
MONOCLONAL ANTIBODY C219 protein, length: 113 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 15498
95 % 2 3 14532 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 4 5 10382
70 % 104 188 71
50 % 161 302 22
40 % 463 887 5
30 % 522 1013 7
Entity #2 | Chains: B,D
MONOCLONAL ANTIBODY C219 protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 22853
95 % 2 3 14487
90 % 2 3 14215
70 % 31 82 258
50 % 282 540 8
40 % 464 887 5
30 % 523 1013 7

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.