Sequence Similarity Clusters for the Entities in PDB 1AOX

Entity #1 | Chains: A,B
INTEGRIN ALPHA 2 BETA protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 14 570
95 % 3 16 671 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 3 16 696
70 % 3 16 745
50 % 8 25 657
40 % 8 25 692
30 % 37 76 300

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 5HGJ 1 A, B Integrin alpha-1 Extracellular VWFA domain residues 170-364 9606
2 1PT6 1 A, B Integrin alpha-1 residue 136-338 9606
3 4A0Q 1 A, B INTEGRIN ALPHA-1 INTEGRIN ALPHA1 I-DOMAIN, RESIDUES 166-366 9606
4 1V7P 3 C Integrin alpha-2 RESIDUES 138-337 9606
5 1QC5 1 A PROTEIN (ALPHA1 BETA1 INTEGRIN) I-DOMAIN 9606
6 1QC5 2 B PROTEIN (ALPHA1 BETA1 INTEGRIN) I-DOMAIN 9606
7 1DZI 1 A INTEGRIN ALPHA2 I DOMAIN 9606
8 1AOX 1 A, B INTEGRIN ALPHA 2 BETA I DOMAIN 9606
9 1QCY 1 A I-DOMAIN OF INTEGRIN ALPHA1BETA1 FRAGMENT, I-DOMAIN OF HUMAN INTEGRIN A1B1 9606
10 5HJ2 1 A, B, C, D, E, F Integrin alpha-2 VWFA domain residues 170-366 9606
11 1CK4 1 A, B INTEGRIN ALPHA-1 I-DOMAIN 10116
12 1MHP 1 A, B integrin alpha 1, (RESIDUES 169-360) alpha1 I-domain 10116
13 6NDH 3 C, F, I, L, O, R Integrin alpha-2 9606
14 6ND9 3 C, F, I, L, O, R Integrin alpha-2 9606
15 5THP 3 C, F, I, L, O, R Integrin alpha-2 UNP residues 170-366 9606
16 6NDD 3 C, F, I, L, O, R Integrin alpha-2 9606
17 6NDA 3 C, F, I, L, O, R Integrin alpha-2 9606
18 6NDG 3 C, F, I, L, O, R Integrin alpha-2 9606
19 6ND8 3 C, F, I, L, O, R Integrin alpha-2 9606
20 6NDB 3 C, F, I, L, O, R Integrin alpha-2 9606
21 6NDC 3 C, F, I, L, O, R Integrin alpha-2 9606
22 4BJ3 1 A, B INTEGRIN ALPHA-2 I DOMAIN, RESIDUES 171-368 9606
23 6NDF 3 C, F, I, L, O, R Integrin alpha-2 9606
24 6NDE 3 C, F, I, L, O, R Integrin alpha-2 9606
25 2M32 1 A Integrin alpha-1 9606