Sequence Similarity Clusters for the Entities in PDB 1AOX

Entity #1 | Chains: A,B
INTEGRIN ALPHA 2 BETA protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 4419
95 % 3 6 3733 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 1.3
PDBFlex
90 % 3 6 3803
70 % 3 6 3732
50 % 8 15 1990
40 % 8 15 1980
30 % 37 63 441

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures