Sequence Similarity Clusters for the Entities in PDB 1AOV

Entity #1 | Chains: A
APO-OVOTRANSFERRIN protein, length: 686 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 40393
95 % 2 2 34056 Flexibility: Medium
Max RMSD: 8.2, Avg RMSD: 8.2
PDBFlex
90 % 2 2 32567
70 % 6 7 10490
50 % 46 51 888
40 % 46 51 913
30 % 46 51 903

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures