Sequence Similarity Clusters for the Entities in PDB 1AOK

Entity #1 | Chains: A
VIPOXIN COMPLEX protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67825
95 % 3 4 14920 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 3 5 7967
70 % 3 6 5157
50 % 67 170 149
40 % 110 296 102
30 % 110 296 114
Entity #2 | Chains: B
VIPOXIN COMPLEX protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67826
95 % 2 4 9800 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 2 5 6096
70 % 2 5 5946
50 % 68 170 149
40 % 111 296 102
30 % 111 296 114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures