Sequence Similarity Clusters for the Entities in PDB 1AOK

Entity #1 | Chains: A
VIPOXIN COMPLEX protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63432
95 % 3 4 15429 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.8
PDBFlex
90 % 3 5 7966
70 % 3 7 4908
50 % 68 181 154
40 % 111 307 103
30 % 111 307 117
Entity #2 | Chains: B
VIPOXIN COMPLEX protein, length: 122 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63431
95 % 2 5 6332 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.9
PDBFlex
90 % 2 5 6322
70 % 2 5 6152
50 % 69 181 154
40 % 112 307 103
30 % 112 307 117

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures