Sequence Similarity Clusters for the Entities in PDB 1AMY

Entity #1 | Chains: A
1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 17809
95 % 3 3 16156 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 15845
70 % 12 13 3240
50 % 12 13 3167
40 % 12 13 3087
30 % 12 13 2889

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.