Sequence Similarity Clusters for the Entities in PDB 1AMY

Entity #1 | Chains: A
1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 17504
95 % 3 3 15871 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 15562
70 % 12 13 3191
50 % 12 13 3118
40 % 12 13 3042
30 % 12 13 2843

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.