Sequence Similarity Clusters for the Entities in PDB 1AMY

Entity #1 | Chains: A
1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 18041
95 % 3 3 16348 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 16039
70 % 12 13 3292
50 % 12 13 3207
40 % 12 13 3122
30 % 12 13 2922

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures