Sequence Similarity Clusters for the Entities in PDB 1AMY

Entity #1 | Chains: A
1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 23362
95 % 3 3 20839 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 20221
70 % 12 13 3518
50 % 12 13 3434
40 % 12 13 3294
30 % 20 21 2193

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures