Sequence Similarity Clusters for the Entities in PDB 1AMY

Entity #1 | Chains: A
1,4-ALPHA-D-GLUCAN GLUCANOHYDROLASE protein, length: 403 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 18708
95 % 3 3 16876 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 3 3 16550
70 % 12 13 3401
50 % 12 13 3321
40 % 12 13 3226
30 % 12 13 3020

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures