Sequence Similarity Clusters for the Entities in PDB 1AMU

Entity #1 | Chains: A,B
GRAMICIDIN SYNTHETASE 1 protein, length: 563 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 40887
95 % 1 1 34451 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 32939
70 % 1 1 29383
50 % 1 1 25094
40 % 2 6 8522
30 % 57 137 244

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures