Sequence Similarity Clusters for the Entities in PDB 1AMU

Entity #1 | Chains: A,B
GRAMICIDIN SYNTHETASE 1 protein, length: 563 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 41712
95 % 1 1 35104 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.4
PDBFlex
90 % 1 1 33525
70 % 1 1 29870
50 % 1 1 25489
40 % 2 6 8715
30 % 58 142 233

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures