Sequence Similarity Clusters for the Entities in PDB 1AMQ

Entity #1 | Chains: A
ASPARTATE AMINOTRANSFERASE protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 33 1033
95 % 44 93 346 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.8
PDBFlex
90 % 44 93 362
70 % 44 93 405
50 % 44 93 463
40 % 65 139 233
30 % 80 158 208

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures