Sequence Similarity Clusters for the Entities in PDB 1AMK

Entity #1 | Chains: A
TRIOSE PHOSPHATE ISOMERASE protein, length: 251 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 58245
95 % 5 8 9135 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.2
PDBFlex
90 % 5 8 9045
70 % 11 67 281
50 % 30 151 122
40 % 36 195 102
30 % 36 197 114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.