Sequence Similarity Clusters for the Entities in PDB 1AMF

Entity #1 | Chains: A
MOLYBDATE TRANSPORT PROTEIN MODA protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 19780
95 % 3 5 9262 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.5
PDBFlex
90 % 3 5 9772
70 % 3 5 9309
50 % 5 7 4764
40 % 6 8 4114
30 % 6 9 2996

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures