Sequence Similarity Clusters for the Entities in PDB 1AME

Entity #1 | Chains: A
TYPE III ANTIFREEZE PROTEIN ISOFORM HPLC 12 protein, length: 67 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 6 13622
95 % 8 33 1588 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.3
PDBFlex
90 % 8 33 1624
70 % 9 36 1501
50 % 10 38 1425
40 % 10 38 1443
30 % 10 38 1415

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.