Sequence Similarity Clusters for the Entities in PDB 1AM4

Entity #1 | Chains: A,B,C
P50-RHOGAP protein, length: 199 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 21264
95 % 3 3 14273
90 % 3 3 14005
70 % 3 3 13159
50 % 3 3 11709
40 % 3 3 10612
30 % 3 3 9212
Entity #2 | Chains: D,E,F
CDC42HS protein, length: 177 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 5 6425
95 % 23 37 899
90 % 23 37 932
70 % 54 78 319
50 % 102 137 187
40 % 103 138 202
30 % 606 772 16

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.