Sequence Similarity Clusters for the Entities in PDB 1ALY

Entity #1 | Chains: A
CD40 LIGAND protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4339
95 % 1 4 5125 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 4 5147
70 % 1 4 5068
50 % 1 4 4845
40 % 1 4 4587
30 % 1 4 4205

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.