Sequence Similarity Clusters for the Entities in PDB 1ALY

Entity #1 | Chains: A
CD40 LIGAND protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 4421
95 % 1 4 5204 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.0
PDBFlex
90 % 1 4 5225
70 % 1 4 5135
50 % 1 4 4911
40 % 1 4 4651
30 % 1 4 4260

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures