Sequence Similarity Clusters for the Entities in PDB 1ALL

Entity #1 | Chains: A
ALLOPHYCOCYANIN protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66174
95 % 1 1 45779
90 % 1 1 43383
70 % 2 10 1460
50 % 3 13 1183
40 % 39 87 32
30 % 68 143 18
Entity #2 | Chains: B
ALLOPHYCOCYANIN protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66108
95 % 1 1 45732
90 % 3 8 2858
70 % 3 12 1135
50 % 3 12 1184
40 % 40 87 32
30 % 69 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures