Sequence Similarity Clusters for the Entities in PDB 1ALL

Entity #1 | Chains: A
ALLOPHYCOCYANIN protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65320
95 % 1 1 45206
90 % 1 1 42862
70 % 2 10 1445
50 % 3 13 1165
40 % 39 87 30
30 % 68 143 18
Entity #2 | Chains: B
ALLOPHYCOCYANIN protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 65254
95 % 1 1 45159
90 % 3 8 2813
70 % 3 12 1118
50 % 3 12 1166
40 % 40 87 30
30 % 69 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures