Sequence Similarity Clusters for the Entities in PDB 1ALL

Entity #1 | Chains: A
ALLOPHYCOCYANIN protein, length: 160 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64342
95 % 1 1 44591
90 % 1 1 42302
70 % 2 10 1418
50 % 3 13 1147
40 % 39 87 24
30 % 68 143 18
Entity #2 | Chains: B
ALLOPHYCOCYANIN protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64275
95 % 1 1 44544
90 % 3 8 2764
70 % 3 12 1104
50 % 3 12 1148
40 % 40 87 24
30 % 69 143 18

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures