Sequence Similarity Clusters for the Entities in PDB 1AL0

Entity #1 | Chains: 1,2,3,4
SCAFFOLDING PROTEIN GPD protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 4 3678
95 % 3 4 4385
90 % 3 4 4406
70 % 3 4 4319
50 % 3 4 4180
40 % 3 4 3990
30 % 3 4 3674
Entity #2 | Chains: F
CAPSID PROTEIN GPF protein, length: 426 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 30086
95 % 3 3 19829
90 % 3 3 19294
70 % 5 6 9698
50 % 6 7 7940
40 % 6 7 7304
30 % 6 7 6471
Entity #3 | Chains: G
SPIKE PROTEIN GPG protein, length: 175 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 25870
95 % 3 3 21506
90 % 3 3 20821
70 % 3 3 19106
50 % 3 3 16612
40 % 3 3 14828
30 % 6 7 6691
Entity #4 | Chains: B
SCAFFOLDING PROTEIN GPB protein, length: 120 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 42117
95 % 2 2 31524
90 % 2 2 30193
70 % 2 2 27023
50 % 2 2 23175
40 % 2 2 20391
30 % 2 2 17249

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.